EnhancerDB
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  3. rs10206629[chr2:38920333]
Enhancers that have rs10206629[chr2:38920333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs10206629[chr2:38920333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38920325 38920340 SCRT1 JASPAR yes 73165399
chr2 38920326 38920338 GRHL1 JASPAR yes 73165400
chr2 38920329 38920335 PTF TRANSFAC yes 73165401
Genes associated with rs10206629[chr2:38920333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 38893052 38968379 + GALM ENSG00000143891.12 38893052 0 Pancreas 2.96652e-05 2289