EnhancerDB
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  3. rs10412434[chr19:2552849]
Enhancers that have rs10412434[chr19:2552849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10412434[chr19:2552849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2552842 2552863 ZNF263 JASPAR yes 112073792
chr19 2552844 2552864 RREB1 JASPAR yes 112073793
chr19 2552845 2552866 ZNF263 JASPAR yes 112073794
chr19 2552846 2552856 ZNF740 JASPAR yes 112073795
chr19 2552847 2552857 ZNF740 JASPAR yes 112073796
chr19 2552848 2552858 SP1 JASPAR yes 112073797
chr19 2552848 2552858 ZNF740 JASPAR yes 112073798
chr19 2552848 2552868 RREB1 JASPAR yes 112073799
chr19 2552849 2552859 SP1 JASPAR yes 112073800
chr19 2552849 2552859 ZNF740 JASPAR yes 112073801
Genes associated with rs10412434[chr19:2552849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More