EnhancerDB
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  3. rs10412539[chr19:10725242]
Enhancers that have rs10412539[chr19:10725242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10720517 10735795 enh17916
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs10412539[chr19:10725242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10725234 10725247 DUXA JASPAR yes 112426959
chr19 10725235 10725246 DUX4 JASPAR yes 112426960
chr19 10725235 10725246 PHOX2A JASPAR yes 112426961
chr19 10725235 10725246 PROP1 JASPAR yes 112426962
chr19 10725237 10725252 HNF1A JASPAR yes 112426963
chr19 10725238 10725248 EMX1 JASPAR yes 112426964
chr19 10725238 10725248 EMX2 JASPAR yes 112426965
chr19 10725238 10725248 ESX1 JASPAR yes 112426966
chr19 10725238 10725248 GBX1 JASPAR yes 112426967
chr19 10725238 10725248 GBX2 JASPAR yes 112426968
chr19 10725238 10725248 GSX1 JASPAR yes 112426969
chr19 10725238 10725248 GSX2 JASPAR yes 112426970
chr19 10725238 10725248 HESX1 JASPAR yes 112426971
chr19 10725238 10725248 HOXA2 JASPAR yes 112426972
chr19 10725238 10725248 HOXB2 JASPAR yes 112426973
chr19 10725238 10725248 HOXB3 JASPAR yes 112426974
chr19 10725238 10725248 LBX2 JASPAR yes 112426975
chr19 10725238 10725248 LHX2 JASPAR yes 112426976
chr19 10725238 10725248 LHX6 JASPAR yes 112426977
chr19 10725238 10725248 MEOX1 JASPAR yes 112426978
chr19 10725238 10725248 MEOX2 JASPAR yes 112426979
chr19 10725238 10725248 MIXL1 JASPAR yes 112426980
chr19 10725238 10725248 MNX1 JASPAR yes 112426981
chr19 10725238 10725248 NOTO JASPAR yes 112426982
chr19 10725238 10725248 POU6F1 JASPAR yes 112426983
chr19 10725238 10725248 RAX JASPAR yes 112426984
chr19 10725239 10725247 BSX JASPAR yes 112426985
chr19 10725239 10725247 DLX6 JASPAR yes 112426986
chr19 10725239 10725247 EN1 JASPAR yes 112426987
chr19 10725239 10725247 ISX JASPAR yes 112426988
chr19 10725239 10725247 LBX1 JASPAR yes 112426989
chr19 10725239 10725247 LHX9 JASPAR yes 112426990
chr19 10725239 10725247 LMX1A JASPAR yes 112426991
chr19 10725239 10725247 LMX1B JASPAR yes 112426992
chr19 10725239 10725247 NKX6-1 JASPAR yes 112426993
chr19 10725239 10725247 NKX6-2 JASPAR yes 112426994
chr19 10725239 10725247 PAX4 JASPAR yes 112426995
chr19 10725239 10725247 PDX1 JASPAR yes 112426996
chr19 10725239 10725247 PRRX1 JASPAR yes 112426997
chr19 10725239 10725247 RAX2 JASPAR yes 112426998
chr19 10725239 10725247 SHOX JASPAR yes 112426999
chr19 10725239 10725247 UNCX JASPAR yes 112427000
chr19 10725239 10725247 VAX1 JASPAR yes 112427001
chr19 10725239 10725247 VAX2 JASPAR yes 112427002
chr19 10725239 10725247 VSX1 JASPAR yes 112427003
chr19 10725239 10725247 VSX2 JASPAR yes 112427004
chr19 10725241 10725249 HOXA5 JASPAR yes 112427005
Genes associated with rs10412539[chr19:10725242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More