EnhancerDB
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  3. rs10420168[chr19:6112077]
Enhancers that have rs10420168[chr19:6112077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10420168[chr19:6112077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6110815 6112132 TCF7L2 GTRD no Colon (HCT116) 21844747
chr19 6110815 6112132 TCF7L2 GTRD no Colon (HCT116) 108377381
chr19 6111227 6112129 ZNF274 GTRD no Bone Marrow (K562) 21844749
chr19 6111227 6112129 ZNF274 GTRD no Bone Marrow (K562) 108377383
chr19 6112073 6112086 SMAD2 JASPAR yes 112259054
chr19 6112077 6112081 NFE TRANSFAC yes 112259055
Genes associated with rs10420168[chr19:6112077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More