EnhancerDB
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  3. rs10420463[chr19:13960804]
Enhancers that have rs10420463[chr19:13960804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10420463[chr19:13960804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 21852522
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 108390514
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 108390515
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 21852523
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 108390517
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 108390518
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 21852526
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 108390521
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 108390522
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 21852530
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 108390527
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 108390528
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 21852531
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 108390529
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 108390530
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 21852533
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 108390532
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 108390533
chr19 13959387 13960879 TCF7L2 GTRD no Colon (HCT116) 21852536
chr19 13959387 13960879 TCF7L2 GTRD no Colon (HCT116) 108390537
chr19 13959396 13961379 ZNF143 GTRD no Epithelial (MCF-7) 21852537
chr19 13959396 13961379 ZNF143 GTRD no Epithelial (MCF-7) 108390538
chr19 13959477 13961665 ZNF143 GTRD no Epithelial (MCF-7) 21852538
chr19 13959477 13961665 ZNF143 GTRD no Epithelial (MCF-7) 108390539
chr19 13959612 13960811 ZNF274 GTRD no Bone Marrow (K562) 21852539
chr19 13959612 13960811 ZNF274 GTRD no Bone Marrow (K562) 108390540
chr19 13959675 13961041 ZNF143 GTRD no Epithelial (MCF-7) 21852543
chr19 13959675 13961041 ZNF143 GTRD no Epithelial (MCF-7) 108390543
chr19 13959920 13960867 ZNF274 GTRD no Bone Marrow (K562) 21852568
chr19 13959920 13960867 ZNF274 GTRD no Bone Marrow (K562) 108390570
chr19 13959957 13960886 ZNF143 GTRD no Epithelial (MCF-7) 21852575
chr19 13959957 13960886 ZNF143 GTRD no Epithelial (MCF-7) 108390582
chr19 13960096 13960806 ZNF274 GTRD no Cervix (HeLa-S3) 21852581
chr19 13960120 13961023 ZNF143 GTRD no Epithelial (MCF-7) 21852582
chr19 13960153 13960856 ZNF143 GTRD no Epithelial (MCF-7) 21852583
chr19 13960233 13960873 ZNF143 GTRD no Epithelial (MCF-7) 21852584
chr19 13960333 13960897 ZNF274 GTRD no Bone Marrow (K562) 21852588
chr19 13960520 13961362 ZNF274 GTRD no Bone Marrow (K562) 21852590
chr19 13960689 13961281 ZNF274 GTRD no Blood (GM12878) 21852591
chr19 13960714 13961245 TCF7L2 GTRD no Colon (HCT116) 21852592
Genes associated with rs10420463[chr19:13960804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More