EnhancerDB
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  3. rs10445312[chr17:39062408]
Enhancers that have rs10445312[chr17:39062408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs10445312[chr17:39062408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39062395 39062415 TP53 JASPAR yes 54242597
chr17 39062401 39062413 BHLHE23 JASPAR yes 54242598
chr17 39062402 39062412 NEUROD2 JASPAR yes 54242599
Genes associated with rs10445312[chr17:39062408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 38904273 38911584 - KRT25 ENSG00000204897.6 38911584 150824 Esophagus 0.210269 15775
chr17 39642388 39648798 - KRT36 ENSG00000126337.9 39648798 579980 Ovary 0.40039 15828