EnhancerDB
  1. Home
  2. SNP
  3. rs10474348[chr5:90597979]
Enhancers that have rs10474348[chr5:90597979]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10474348[chr5:90597979]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90597964 90597979 TFAP2A JASPAR yes 64190055
chr5 90597964 90597979 TFAP2C JASPAR yes 64190056
chr5 90597966 90597981 TFAP2A JASPAR yes 64190057
chr5 90597966 90597981 TFAP2C JASPAR yes 64190058
Genes associated with rs10474348[chr5:90597979], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More