EnhancerDB
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  3. rs10489707[chr1:185628884]
Enhancers that have rs10489707[chr1:185628884]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs10489707[chr1:185628884]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185628869 185628884 HNF4G JASPAR yes 33832349
chr1 185628882 185628891 SRY JASPAR yes 33832350
chr1 185628884 185628900 SOX4 JASPAR yes 33832351
Genes associated with rs10489707[chr1:185628884], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More