EnhancerDB
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  3. rs10494947[chr1:212089141]
Enhancers that have rs10494947[chr1:212089141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs10494947[chr1:212089141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212088273 212089143 P63 GTRD no Skin (Keratinocyte) 21377500
chr1 212088998 212090496 ZNF274 GTRD no Blood (GM12878) 21377511
chr1 212089084 212090334 ZNF274 GTRD no Blood (GM12878) 21377512
chr1 212089134 212089144 NFIA JASPAR yes 35090859
chr1 212089135 212089144 NFIX JASPAR yes 35090860
chr1 212089136 212089142 NFIC JASPAR yes 35090861
Genes associated with rs10494947[chr1:212089141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More