EnhancerDB
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  3. rs10495216[chr1:223904595]
Enhancers that have rs10495216[chr1:223904595]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10495216[chr1:223904595]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223904267 223904637 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21383915
chr1 223904267 223904637 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873104
chr1 223904460 223904960 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107873105
chr1 223904585 223904599 ONECUT1 JASPAR yes 35671789
chr1 223904585 223904599 ONECUT2 JASPAR yes 35671790
chr1 223904585 223904599 ONECUT3 JASPAR yes 35671791
chr1 223904586 223904599 DUXA JASPAR yes 35671792
chr1 223904587 223904598 DUX4 JASPAR yes 35671793
chr1 223904587 223904598 PHOX2A JASPAR yes 35671794
chr1 223904587 223904598 PROP1 JASPAR yes 35671795
chr1 223904588 223904598 PAX3 JASPAR yes 35671796
chr1 223904588 223904598 PAX7 JASPAR yes 35671797
chr1 223904590 223904599 VENTX JASPAR yes 35671798
chr1 223904590 223904600 HESX1 JASPAR yes 35671799
chr1 223904590 223904600 LBX2 JASPAR yes 35671800
chr1 223904590 223904600 MIXL1 JASPAR yes 35671801
chr1 223904590 223904600 RAX JASPAR yes 35671802
chr1 223904591 223904599 LHX9 JASPAR yes 35671803
chr1 223904591 223904599 SHOX JASPAR yes 35671804
Genes associated with rs10495216[chr1:223904595], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More