EnhancerDB
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  3. rs10533668[chr12:46783217]
Enhancers that have rs10533668[chr12:46783217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46774225 46791355 enh14675
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10533668[chr12:46783217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46783117 46783413 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21541285
chr12 46783125 46783461 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21541286
chr12 46783203 46783220 RARA JASPAR yes 120614200
chr12 46783203 46783220 RXRA JASPAR yes 120614201
chr12 46783212 46783232 RREB1 JASPAR yes 120614202
Genes associated with rs10533668[chr12:46783217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More