EnhancerDB
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  3. rs10544013[chr17:62955837]
Enhancers that have rs10544013[chr17:62955837]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10544013[chr17:62955837]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62952883 62958112 ZNF143 GTRD no Epithelial (MCF-7) 21779990
chr17 62953744 62957520 ZNF143 GTRD no Epithelial (MCF-7) 21779992
chr17 62954118 62958130 ZNF143 GTRD no Epithelial (MCF-7) 21779997
chr17 62954223 62957434 ZNF143 GTRD no Epithelial (MCF-7) 21779998
chr17 62954931 62957350 ZNF143 GTRD no Epithelial (MCF-7) 21780000
chr17 62955084 62956769 ZNF143 GTRD no Epithelial (MCF-7) 21780001
chr17 62955250 62956499 ZNF143 GTRD no Epithelial (MCF-7) 21780002
chr17 62955384 62956504 ZNF143 GTRD no Epithelial (MCF-7) 21780004
chr17 62955499 62957071 ZNF143 GTRD no Epithelial (MCF-7) 21780009
chr17 62955505 62956991 ZNF143 GTRD no Epithelial (MCF-7) 21780010
chr17 62955518 62956567 ZNF143 GTRD no Epithelial (MCF-7) 21780011
chr17 62955533 62956751 ZNF143 GTRD no Epithelial (MCF-7) 21780012
chr17 62955572 62956433 ZNF143 GTRD no Epithelial (MCF-7) 21780013
chr17 62955659 62956774 ZNF143 GTRD no Epithelial (MCF-7) 21780014
chr17 62955661 62956853 ZNF143 GTRD no Epithelial (MCF-7) 21780015
chr17 62955666 62956417 ZNF143 GTRD no Epithelial (MCF-7) 21780016
chr17 62955690 62956889 ZNF143 GTRD no Epithelial (MCF-7) 21780017
chr17 62955690 62956896 ZNF143 GTRD no Epithelial (MCF-7) 21780018
chr17 62955701 62956456 ZNF143 GTRD no Epithelial (MCF-7) 21780019
chr17 62955715 62956302 ZNF143 GTRD no Epithelial (MCF-7) 21780020
chr17 62955728 62956429 ZNF143 GTRD no Epithelial (MCF-7) 21780021
chr17 62955731 62956550 ZNF143 GTRD no Epithelial (MCF-7) 21780022
chr17 62955800 62956448 ZNF143 GTRD no Epithelial (MCF-7) 21780023
chr17 62955818 62955838 TBX19 JASPAR yes 55331280
chr17 62955835 62955841 HiNF-A TRANSFAC yes 55331282
chr17 62955836 62955856 RREB1 JASPAR yes 55331283
Genes associated with rs10544013[chr17:62955837], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More