EnhancerDB
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  3. rs10545593[chr17:62998201]
Enhancers that have rs10545593[chr17:62998201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10545593[chr17:62998201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62997701 62998271 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780989
chr17 62998033 62999042 ZBTB33 GTRD no Brain (SK-N-SH) 21780990
chr17 62998186 62998205 PAX5 JASPAR yes 55337863
chr17 62998195 62998216 IRF1 JASPAR yes 55337865
chr17 62998196 62998217 IRF1 JASPAR yes 55337866
chr17 62998200 62998215 FOXP1 JASPAR yes 55337867
chr17 62998201 62998216 FOXP1 JASPAR yes 55337868
Genes associated with rs10545593[chr17:62998201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More