EnhancerDB
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  3. rs1054950[chr1:35316058]
Enhancers that have rs1054950[chr1:35316058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 35306394 35321215 enh226
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Esophagus Placenta Breast Spleen Prostate (RWPE1) Lung Heart
Transcript factors that have rs1054950[chr1:35316058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 35316049 35316064 HNF1A JASPAR yes 28078285
chr1 35316050 35316063 HNF1B JASPAR yes 28078286
chr1 35316053 35316063 EMX1 JASPAR yes 28078287
chr1 35316053 35316063 EMX2 JASPAR yes 28078288
chr1 35316053 35316063 EVX2 JASPAR yes 28078289
chr1 35316053 35316063 GBX1 JASPAR yes 28078290
chr1 35316053 35316063 GBX2 JASPAR yes 28078291
chr1 35316053 35316063 GSX1 JASPAR yes 28078292
chr1 35316053 35316063 HOXA2 JASPAR yes 28078293
chr1 35316053 35316063 HOXB2 JASPAR yes 28078294
chr1 35316053 35316063 HOXB3 JASPAR yes 28078295
chr1 35316053 35316063 LHX2 JASPAR yes 28078296
chr1 35316053 35316063 LHX6 JASPAR yes 28078297
chr1 35316053 35316063 MEOX1 JASPAR yes 28078298
chr1 35316053 35316063 MEOX2 JASPAR yes 28078299
chr1 35316053 35316063 NOTO JASPAR yes 28078300
chr1 35316053 35316063 POU6F1 JASPAR yes 28078301
chr1 35316054 35316062 DLX6 JASPAR yes 28078302
chr1 35316054 35316062 EN1 JASPAR yes 28078303
chr1 35316054 35316062 LBX1 JASPAR yes 28078304
chr1 35316054 35316062 PAX4 JASPAR yes 28078305
chr1 35316054 35316062 PDX1 JASPAR yes 28078306
chr1 35316054 35316062 VAX1 JASPAR yes 28078307
chr1 35316054 35316062 VAX2 JASPAR yes 28078308
chr1 35316054 35316062 VSX1 JASPAR yes 28078309
chr1 35316054 35316062 VSX2 JASPAR yes 28078310
Genes associated with rs1054950[chr1:35316058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More