EnhancerDB
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  3. rs1056882[chr19:13942704]
Enhancers that have rs1056882[chr19:13942704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1056882[chr19:13942704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389982
chr19 13940633 13945906 POLR2A UCSC Txn Factor no Conserved 108389983
chr19 13941797 13942787 ZNF274 GTRD no Bone Marrow (K562) 21851574
chr19 13942029 13942958 ZNF274 GTRD no Bone Marrow (K562) 21851576
chr19 13942107 13942810 ZNF274 GTRD no Bone Marrow (K562) 21851578
chr19 13942115 13942739 ZNF274 GTRD no Cervix (HeLa-S3) 21851579
chr19 13942149 13942713 ZNF274 GTRD no Liver (HepG2) 21851581
chr19 13942175 13942888 ZNF274 GTRD no Bone Marrow (K562) 21851582
chr19 13942250 13942714 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21851587
chr19 13942258 13942889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851588
chr19 13942259 13942751 ZNF274 GTRD no Bone Marrow (K562) 21851589
chr19 13942337 13942741 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851593
chr19 13942354 13942723 ZNF274 GTRD no Liver (HepG2) 21851594
chr19 13942356 13942816 ZNF143 GTRD no Epithelial (MCF-7) 21851595
chr19 13942428 13942889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851596
chr19 13942593 13943197 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851597
chr19 13942656 13942941 ZNF143 GTRD no Epithelial (MCF-7) 21851598
chr19 13942703 13942718 STAT2 JASPAR yes 112535405
chr19 13942704 13942718 STAT1 JASPAR yes 112535406
Genes associated with rs1056882[chr19:13942704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More