EnhancerDB
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  3. rs10575990[chr3:119880525]
Enhancers that have rs10575990[chr3:119880525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119860605 119883439 enh7479
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs10575990[chr3:119880525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119880520 119880532 PBX1 JASPAR yes 5198522
chr3 119880521 119880534 DUXA JASPAR yes 5198523
chr3 119880521 119880535 ONECUT1 JASPAR yes 5198524
chr3 119880521 119880535 ONECUT2 JASPAR yes 5198525
chr3 119880521 119880535 ONECUT3 JASPAR yes 5198526
chr3 119880522 119880532 PAX3 JASPAR yes 5198527
chr3 119880522 119880532 PAX7 JASPAR yes 5198528
chr3 119880522 119880533 DUX4 JASPAR yes 5198529
Genes associated with rs10575990[chr3:119880525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More