EnhancerDB
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  3. rs1060104[chr12:122234574]
Enhancers that have rs1060104[chr12:122234574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1060104[chr12:122234574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122229445 122242257 POLR2A UCSC Txn Factor no Conserved 108065674
Genes associated with rs1060104[chr12:122234574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 123104824 123215390 - HCAR1 ENSG00000196917.4 123215390 870250 Esophagus 0.138101 12649
chr12 123185840 123187890 - HCAR2 ENSG00000182782.7 123187890 951266 Uterus 0.281129 12650