EnhancerDB
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Chromosome characteristics of POLR2A[chr12:122229445-122242257]
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Enhancers possibly regulated by POLR2A[chr12:122229445-122242257]
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Chrom Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr12 122229588 122230472 vista15194
VISTA
SNP sites on POLR2A[chr12:122229445-122242257]
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Chrom Position dbSNP ID Reference Allele Alternative Allele id More
chr12 122229649 rs113435204 C T 2955130
chr12 122229681 rs150064976 G A 2955131
chr12 122229753 rs559904235 A G 2955132
chr12 122229848 rs1168671 C T 2955133
chr12 122229869 rs145397741 A T 2955134
chr12 122229931 rs1168672 T G 2955135
chr12 122229979 rs1168673 A G 2955136
chr12 122230009 rs547137376 G A 2955137
chr12 122230141 rs188292165 G A,C 2955138
chr12 122230154 rs149198697 G A,T 2955139
chr12 122230248 rs370379786 A G 2955140
chr12 122230265 rs181059129 G A 2955141
chr12 122230353 rs186467418 C G,T 2955142
chr12 122230990 rs370554512 G A 2955143
chr12 122231029 rs553552436 CGGGCCCCCCGGCG C 2955144
chr12 122231043 rs575394762 C T 2955145
chr12 122231044 rs17522849 G A,C 2955146
chr12 122231045 rs572885734 CAG C 2955147
chr12 122231183 rs201021224 C G,T 2955148
chr12 122231209 rs113086400 T A 2955149
chr12 122231219 rs559445038 A C 2955150
chr12 122231365 rs200285606 T G 2955151
chr12 122231368 rs2707067 C A 2955152
chr12 122231462 rs372836309 G A 2955153
chr12 122231573 rs2707066 C G,T 2955154
chr12 122231583 rs538768246 C T 2955155
chr12 122231694 rs556990730 T C 2955156
chr12 122231928 rs111387292 G A 2955157
chr12 122231972 rs181707041 C A,T 2955158
chr12 122231989 rs74443882 C T 2955159
chr12 122232006 rs542177733 G C 2955160
chr12 122232039 rs895950 T C 2955161
chr12 122232040 rs76813245 G A 2955162
chr12 122232122 rs528368904 G C 2955163
chr12 122232244 rs186839489 C G,T 2955164
chr12 122232314 rs116734887 G A 2955165
chr12 122232519 rs75276934 C A 2955166
chr12 122232552 rs190742192 G C 2955167
chr12 122232580 rs3809143 C A 2955168
chr12 122232685 rs530391994 GA G 2955169
chr12 122232693 rs201358565 CCT C 2955170
chr12 122232747 rs571819180 T A 2955171
chr12 122232821 rs572949418 G C 2955172
chr12 122232847 rs183262516 G A 2955173
chr12 122232897 rs565152354 C T 2955174
chr12 122232993 rs537558963 AC A 2955175
chr12 122233066 rs77386562 G T 2955176
chr12 122233067 rs115954056 C T 2955177
chr12 122233126 rs533771526 TCTC T 2955178
chr12 122233151 rs538977285 CA C 2955179
chr12 122233345 rs575272467 T C 2955180
chr12 122233371 rs150176320 T A,C 2955181
chr12 122233375 rs6746 C T 2955182
chr12 122233495 rs712852 G C,T 2955183
chr12 122233727 rs560616549 T C 2955184
chr12 122233803 rs138633681 G A,C 2955185
chr12 122233835 rs116022194 G A,C 2955186
chr12 122233904 rs377430259 T TG 2955187
chr12 122233984 rs192748171 G A 2955188
chr12 122234021 rs59126522 G A 2955189
chr12 122234036 rs144552678 C A 2955190
chr12 122234089 rs1168663 T A 2955191
chr12 122234154 rs369499030 G A 2955192
chr12 122234191 rs10840617 C A 2955193
chr12 122234244 rs138066563 T C 2955194
chr12 122234263 rs187539338 G A 2955195
chr12 122234334 rs568756057 C G 2955196
chr12 122234574 rs1060104 C G 2955197
chr12 122234601 rs559103936 C A 2955198
chr12 122234673 rs143547611 C T 2955199
chr12 122234676 rs1168664 G A 2955200
chr12 122234719 rs564539637 G A 2955201
chr12 122234800 rs528160149 C T 2955202
chr12 122234813 rs1168665 A G 2955203
chr12 122234859 rs140330212 C T 2955204
chr12 122234884 rs376048997 G A 2955205
chr12 122234935 rs540873320 CA C 2955206
chr12 122235048 rs142048748 A G 2955207
chr12 122235107 rs74597892 C G,T 2955208
chr12 122235148 rs150704575 C T 2955209
chr12 122235207 rs549420192 G A,C 2955210
chr12 122235312 rs11043201 G A 2955211
chr12 122235321 rs147325698 AG A 2955212
chr12 122235593 rs537564049 G A,C 2955213
chr12 122235604 rs547960606 A AC 2955214
chr12 122235616 rs574210222 G C 2955215
chr12 122235623 rs553672201 G A,T 2955216
chr12 122235667 rs149841504 A G 2955217
chr12 122235669 rs117495184 C T 2955218
chr12 122235804 rs146849386 G A 2955219
chr12 122235811 rs566006810 G A 2955220
chr12 122235864 rs551657045 A C 2955221
chr12 122235915 rs567650628 A G 2955222
chr12 122235924 rs189719057 C T 2955223
chr12 122235951 rs73229934 C G,T 2955224
chr12 122235977 rs371010015 G C 2955225
chr12 122236122 rs144312478 C T 2955226
chr12 122236225 rs374436790 G A 2955227
chr12 122236303 rs148805661 C CG,CGG 2955228
chr12 122236303 rs397968098 C CG 2955229
chr12 122236303 rs57295707 C CG 2955230
chr12 122236427 rs117015121 C A,T 2955231
chr12 122236518 rs80032679 T G 2955232
chr12 122236538 rs181680063 C T 2955233
chr12 122236782 rs74502120 T C 2955234
chr12 122236798 rs112560372 G C 2955235
chr12 122236799 rs182702810 C A 2955236
chr12 122236831 rs555217754 C T 2955237
chr12 122236925 rs552839415 A C 2955238
chr12 122236994 rs563473152 C G 2955239
chr12 122237115 rs895951 A G 2955240
chr12 122237118 rs565081128 G A 2955241
chr12 122237305 rs539368173 TG T 2955242
chr12 122237402 rs1449561 T C 2955243
chr12 122237413 rs58754361 G A 2955244
chr12 122237667 rs534359204 G A 2955245
chr12 122237671 rs2720038 T G 2955246
chr12 122237723 rs538759548 C T 2955247
chr12 122237756 rs191259043 A G 2955248
chr12 122237768 rs373390756 G A 2955249
chr12 122237992 rs551165707 G T 2955250
chr12 122238003 rs368792239 G A 2955251
chr12 122238068 rs187333561 C T 2955252
chr12 122238113 rs566907657 G A 2955253
chr12 122238147 rs151237143 C G,T 2955254
chr12 122238278 rs140394366 C T 2955255
chr12 122238300 rs1795966 G A 2955256
chr12 122238380 rs1667578 T G 2955257
chr12 122238467 rs572906817 G A 2955258
chr12 122238477 rs540160385 G C 2955259
chr12 122238482 rs558398323 A G 2955260
chr12 122238802 rs192110769 C T 2955261
chr12 122238857 rs372103062 G A 2955262
chr12 122238858 rs549146630 C G 2955263
chr12 122238879 rs150368731 G C 2955264
chr12 122239056 rs183144890 C G 2955265
chr12 122239074 rs1667579 C A 2955266
chr12 122239144 rs78534688 A C 2955267
chr12 122239185 rs537703918 T A 2955268
chr12 122239210 rs138129637 G A 2955269
chr12 122239214 rs375381275 A AG 2955270
chr12 122239214 rs538274524 A AG 2955271
chr12 122239242 rs571200612 T C 2955272
chr12 122239287 rs560366685 G A 2955273
chr12 122239307 rs78576452 C T 2955274
chr12 122239324 rs557126354 C T 2955275
chr12 122239383 rs532054945 T C 2955276
chr12 122239383 rs540785780 TCTC T 2955277
chr12 122239463 rs562529042 A G 2955278
chr12 122239608 rs1795965 A G 2955279
chr12 122239970 rs74445459 A G 2955280
chr12 122239976 rs74459612 G A 2955281
chr12 122240296 rs117907593 C T 2955282
chr12 122240346 rs138719610 A G 2955283
chr12 122240377 rs546156649 GAGA G 2955284
chr12 122240461 rs3741594 A G 2955285
chr12 122240484 rs184291186 G T 2955286
chr12 122240864 rs116101750 G C 2955287
chr12 122241003 rs117488874 G A 2955288
chr12 122241041 rs148391132 G T 2955289
chr12 122241491 rs563815589 C G 2955290
chr12 122241506 rs79345802 C G 2955291
chr12 122241613 rs568207760 C G 2955292
chr12 122241647 rs371708468 G A 2955293
chr12 122241804 rs566097534 C G 2955294
Genes possibly regulated by POLR2A[chr12:122229445-122242257]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
chr12 122215664 122241309 - RHOF ENSG00000139725.3 122241309 0.85 1.0 948 12631
chr12 122242086 122270562 + SETD1B ENSG00000139718.6 122242086 0.77 1.0 171 12632
Expression level of Genes
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miRNAs possibly regulated by POLR2A[chr12:122229445-122242257]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End strand miRNA Name miRBase ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of miRNAs
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No results