EnhancerDB
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  3. rs10783498[chr12:52607410]
Enhancers that have rs10783498[chr12:52607410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs10783498[chr12:52607410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52607109 52607769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546726
chr12 52607139 52607715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546727
chr12 52607154 52607618 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546728
chr12 52607170 52607546 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546729
chr12 52607178 52607642 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546730
chr12 52607218 52607578 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546731
chr12 52607225 52607535 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546732
chr12 52607237 52607621 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546733
chr12 52607239 52607635 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546734
chr12 52607240 52607510 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546735
chr12 52607242 52607612 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546736
chr12 52607245 52607501 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21546737
chr12 52607256 52607594 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546738
chr12 52607264 52607570 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546739
chr12 52607273 52607593 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546740
chr12 52607275 52607599 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21546741
chr12 52607275 52607651 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546742
chr12 52607279 52607521 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546743
chr12 52607290 52607558 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546744
chr12 52607293 52607551 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546745
chr12 52607306 52607626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546746
chr12 52607310 52607600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546747
chr12 52607317 52607589 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546748
chr12 52607319 52607590 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546749
chr12 52607401 52607416 TFAP2C JASPAR yes 120928801
chr12 52607403 52607418 TFAP2A JASPAR yes 120928802
chr12 52607404 52607415 TFAP2A JASPAR yes 120928803
chr12 52607404 52607415 TFAP2B JASPAR yes 120928804
chr12 52607404 52607415 TFAP2C JASPAR yes 120928805
chr12 52607406 52607553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546750
Genes associated with rs10783498[chr12:52607410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More