EnhancerDB
  1. Home
  2. SNP
  3. rs1078578[chr16:89386934]
Enhancers that have rs1078578[chr16:89386934]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 89384737 89387643 vista670
VISTA
Transcript factors that have rs1078578[chr16:89386934]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89386620 89387214 E2F1 UCSC Txn Factor no Conserved 107687429
chr16 89386689 89387302 TFAP2C UCSC Txn Factor no Conserved 107687430
chr16 89386707 89386968 TFAP2A UCSC Txn Factor no Conserved 107687431
chr16 89386709 89386981 FOS UCSC Txn Factor no Conserved 107687432
chr16 89386725 89387011 FOSL2 UCSC Txn Factor no Conserved 107687433
chr16 89386930 89386945 TFAP2A JASPAR yes 12330773
chr16 89386930 89386945 TFAP2C JASPAR yes 12330774
chr16 89386931 89386936 SP1 TRANSFAC yes 12330775
chr16 89386931 89386937 SP1 TRANSFAC yes 12330776
chr16 89386931 89386938 SP1 TRANSFAC yes 12330777
chr16 89386932 89386944 INSM1 JASPAR yes 12330778
chr16 89386932 89386944 TFAP2A JASPAR yes 12330779
chr16 89386932 89386944 TFAP2B JASPAR yes 12330780
chr16 89386932 89386944 TFAP2C JASPAR yes 12330781
chr16 89386932 89386947 TFAP2A JASPAR yes 12330782
chr16 89386934 89386943 TFAP2A JASPAR yes 12330783
Genes associated with rs1078578[chr16:89386934], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More