EnhancerDB
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  3. rs10788820[chr1:151896233]
Enhancers that have rs10788820[chr1:151896233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs10788820[chr1:151896233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151895764 151896334 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21338073
chr1 151895870 151896366 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21338074
chr1 151896229 151896245 POU4F2 JASPAR yes 32202917
chr1 151896232 151896236 YY1 TRANSFAC yes 32202918
Genes associated with rs10788820[chr1:151896233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More