EnhancerDB
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  3. rs10796427[chr1:16497952]
Enhancers that have rs10796427[chr1:16497952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10796427[chr1:16497952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16497372 16500088 ZNF274 GTRD no Bone Marrow (K562) 107802224
chr1 16497372 16500088 ZNF274 GTRD no Bone Marrow (K562) 107802225
chr1 16497933 16497953 RREB1 JASPAR yes 27030768
chr1 16497936 16497952 ZNF143 JASPAR yes 27030769
chr1 16497936 16497956 RREB1 JASPAR yes 27030770
chr1 16497938 16497958 RREB1 JASPAR yes 27030771
chr1 16497940 16497960 RREB1 JASPAR yes 27030772
chr1 16497945 16497955 SP1 JASPAR yes 27030774
chr1 16497946 16497956 SP1 JASPAR yes 27030775
chr1 16497948 16497953 SP1 TRANSFAC yes 27030776
chr1 16497950 16497970 RREB1 JASPAR yes 27030777
chr1 16497950 16497971 ZNF263 JASPAR yes 27030778
Genes associated with rs10796427[chr1:16497952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More