EnhancerDB
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  3. rs10799309[chr1:225649508]
Enhancers that have rs10799309[chr1:225649508]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10799309[chr1:225649508]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225649494 225649509 NR2C2 JASPAR yes 35743415
chr1 225649502 225649511 SP1 TRANSFAC yes 35743417
chr1 225649503 225649509 SP1 TRANSFAC yes 35743418
chr1 225649503 225649513 SP1 JASPAR yes 35743419
chr1 225649504 225649511 SP1 TRANSFAC yes 35743420
chr1 225649505 225649510 SP1 TRANSFAC yes 35743421
chr1 225649505 225649511 SP1 TRANSFAC yes 35743422
Genes associated with rs10799309[chr1:225649508], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More