EnhancerDB
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  3. rs10807000[chr6:25172912]
Enhancers that have rs10807000[chr6:25172912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs10807000[chr6:25172912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25172907 25172916 ZEB1 JASPAR yes 100831225
chr6 25172907 25172922 SCRT1 JASPAR yes 100831226
chr6 25172908 25172918 FIGLA JASPAR yes 100831227
chr6 25172908 25172918 ID4 JASPAR yes 100831228
chr6 25172908 25172918 TCF3 JASPAR yes 100831229
chr6 25172908 25172918 TCF4 JASPAR yes 100831230
chr6 25172909 25172918 SNAI2 JASPAR yes 100831231
chr6 25172910 25172915 USF2 TRANSFAC yes 100831232
Genes associated with rs10807000[chr6:25172912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 24775159 24786327 + GMNN ENSG00000112312.5 24775159 386585 Liver 0.0788127 6208