EnhancerDB
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  3. rs10827198[chr10:33396197]
Enhancers that have rs10827198[chr10:33396197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33393842 33437095 enh1172
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs10827198[chr10:33396197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33396191 33396201 POU6F2 JASPAR yes 126570925
chr10 33396192 33396202 EMX2 JASPAR yes 126570926
chr10 33396192 33396202 EVX1 JASPAR yes 126570927
chr10 33396192 33396202 EVX2 JASPAR yes 126570928
chr10 33396192 33396202 LHX2 JASPAR yes 126570929
chr10 33396192 33396202 MEOX1 JASPAR yes 126570930
chr10 33396192 33396202 NOTO JASPAR yes 126570931
chr10 33396193 33396201 LBX1 JASPAR yes 126570932
chr10 33396193 33396201 PDX1 JASPAR yes 126570933
chr10 33396193 33396201 VAX1 JASPAR yes 126570934
chr10 33396193 33396201 VAX2 JASPAR yes 126570935
chr10 33396193 33396201 VSX1 JASPAR yes 126570936
chr10 33396193 33396201 VSX2 JASPAR yes 126570937
chr10 33396193 33396203 MEF2A JASPAR yes 126570938
chr10 33396195 33396206 RUNX1 JASPAR yes 126570939
Genes associated with rs10827198[chr10:33396197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More