EnhancerDB
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  3. rs10854122[chr19:13284603]
Enhancers that have rs10854122[chr19:13284603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10854122[chr19:13284603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13284372 13285207 ZNF274 GTRD no Bone Marrow (K562) 21851456
chr19 13284433 13284845 ZNF143 GTRD no Epithelial (MCF-7) 21851457
chr19 13284495 13284811 ZNF274 GTRD no Blood (GM12878) 21851458
chr19 13284516 13284795 ZNF274 GTRD no Blood (GM12878) 21851459
chr19 13284529 13284762 ZNF274 GTRD no Bone Marrow (K562) 21851460
chr19 13284537 13284879 ZNF274 GTRD no Bone Marrow (K562) 21851461
chr19 13284546 13284821 ZNF274 GTRD no Bone Marrow (K562) 21851462
chr19 13284582 13284845 ZNF143 GTRD no Epithelial (MCF-7) 21851463
Genes associated with rs10854122[chr19:13284603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 13009600 13030090 - SYCE2 ENSG00000161860.7 13030090 254513 Esophagus 0.216642 17105