EnhancerDB
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  3. rs10871488[chr17:78739079]
Enhancers that have rs10871488[chr17:78739079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs10871488[chr17:78739079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 21797161
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307245
chr17 78732983 78741058 ZNF274 GTRD no Blood (GM12878) 108307246
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 21797163
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 108307248
chr17 78734050 78741138 ZNF274 GTRD no Blood (GM12878) 108307249
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 21797164
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 108307250
chr17 78734162 78741313 ZNF274 GTRD no Blood (GM12878) 108307251
chr17 78734488 78740118 ZNF274 GTRD no Blood (GM12878) 21797175
chr17 78734488 78740118 ZNF274 GTRD no Blood (GM12878) 108307266
chr17 78734488 78740118 ZNF274 GTRD no Blood (GM12878) 108307267
chr17 78734564 78740118 ZNF274 GTRD no Blood (GM12878) 21797179
chr17 78734564 78740118 ZNF274 GTRD no Blood (GM12878) 108307276
chr17 78734564 78740118 ZNF274 GTRD no Blood (GM12878) 108307277
chr17 78734812 78739626 ZNF274 GTRD no Bone Marrow (K562) 108307317
chr17 78734812 78739626 ZNF274 GTRD no Bone Marrow (K562) 108307318
chr17 78739060 78739081 IRF1 JASPAR yes 56276765
chr17 78739068 78739083 STAT2 JASPAR yes 56276766
chr17 78739069 78739083 SPI1 JASPAR yes 56276767
Genes associated with rs10871488[chr17:78739079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More