EnhancerDB
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  3. rs10876055[chr12:50940983]
Enhancers that have rs10876055[chr12:50940983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs10876055[chr12:50940983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50940972 50940984 PBX1 JASPAR yes 120842018
chr12 50940973 50940987 ONECUT1 JASPAR yes 120842019
chr12 50940973 50940987 ONECUT2 JASPAR yes 120842020
chr12 50940973 50940987 ONECUT3 JASPAR yes 120842021
chr12 50940974 50940984 CUX1 JASPAR yes 120842022
chr12 50940974 50940984 CUX2 JASPAR yes 120842023
chr12 50940974 50940984 PAX3 JASPAR yes 120842024
chr12 50940974 50940984 PAX7 JASPAR yes 120842025
chr12 50940977 50940993 POU4F2 JASPAR yes 120842026
chr12 50940977 50940993 POU4F3 JASPAR yes 120842027
chr12 50940980 50940992 FOXC2 JASPAR yes 120842028
chr12 50940980 50940994 ONECUT1 JASPAR yes 120842029
chr12 50940980 50940994 ONECUT2 JASPAR yes 120842030
chr12 50940980 50940994 ONECUT3 JASPAR yes 120842031
chr12 50940981 50940991 CUX2 JASPAR yes 120842032
chr12 50940981 50940992 FOXC1 JASPAR yes 120842033
Genes associated with rs10876055[chr12:50940983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More