EnhancerDB
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  3. rs10915829[chr1:225641541]
Enhancers that have rs10915829[chr1:225641541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs10915829[chr1:225641541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225641508 225642117 TCF7L2 GTRD no Colon (HCT116) 21384750
chr1 225641539 225641554 TP53 JASPAR yes 35742246
Genes associated with rs10915829[chr1:225641541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 225589204 225616627 - LBR ENSG00000143815.10 225616627 24914 Esophagus 9.15555e-17 1885
chr1 225589204 225616627 - LBR ENSG00000143815.10 225616627 24914 Adrenal 0.091472 1885