EnhancerDB
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  3. rs10916472[chr1:224391184]
Enhancers that have rs10916472[chr1:224391184]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs10916472[chr1:224391184]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224390131 224391897 TEF1 GTRD no Bone (Osteoblast) 21384202
chr1 224391176 224391191 RUNX2 JASPAR yes 35693396
chr1 224391177 224391186 RUNX2 JASPAR yes 35693397
chr1 224391177 224391187 RUNX3 JASPAR yes 35693398
chr1 224391182 224391201 REST JASPAR yes 35693399
Genes associated with rs10916472[chr1:224391184], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More