EnhancerDB
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  3. rs11079353[chr17:42870101]
Enhancers that have rs11079353[chr17:42870101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42867613 42875555 enh17184
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs11079353[chr17:42870101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42870080 42870101 IRF1 JASPAR yes 54414060
chr17 42870082 42870102 RREB1 JASPAR yes 54414061
chr17 42870085 42870106 IRF1 JASPAR yes 54414064
chr17 42870087 42870107 RREB1 JASPAR yes 54414065
chr17 42870090 42870102 IRF1 JASPAR yes 54414066
chr17 42870090 42870105 FOXP1 JASPAR yes 54414067
chr17 42870091 42870112 IRF1 JASPAR yes 54414068
chr17 42870092 42870112 RREB1 JASPAR yes 54414069
chr17 42870093 42870108 IRF9 JASPAR yes 54414070
chr17 42870095 42870107 IRF1 JASPAR yes 54414071
chr17 42870095 42870110 STAT2 JASPAR yes 54414072
Genes associated with rs11079353[chr17:42870101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More