EnhancerDB
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  3. rs111296688[chr4:122613321]
Enhancers that have rs111296688[chr4:122613321]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 122607570 122615535 enh21754
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9)
Transcript factors that have rs111296688[chr4:122613321]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 122611877 122613439 POLR2A UCSC Txn Factor no Conserved 108533344
chr4 122613310 122613324 RXRB JASPAR yes 92460360
chr4 122613310 122613324 RXRG JASPAR yes 92460361
chr4 122613310 122613325 NR2C2 JASPAR yes 92460362
chr4 122613313 122613322 Tf-LF1 TRANSFAC yes 92460363
chr4 122613313 122613326 NR2F1 JASPAR yes 92460364
chr4 122613317 122613327 RORA JASPAR yes 92460365
chr4 122613319 122613325 PTF TRANSFAC yes 92460366
Genes associated with rs111296688[chr4:122613321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More