EnhancerDB
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  3. rs111296788[chr12:50927397]
Enhancers that have rs111296788[chr12:50927397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs111296788[chr12:50927397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50926446 50927478 ZNF274 GTRD no Liver (HepG2) 21545168
chr12 50926446 50927478 ZNF274 GTRD no Liver (HepG2) 108031349
chr12 50926670 50928957 ZNF274 GTRD no Liver (HepG2) 21545200
chr12 50926670 50928957 ZNF274 GTRD no Liver (HepG2) 108031381
chr12 50926785 50927455 ZNF274 GTRD no Liver (HepG2) 21545214
chr12 50926785 50927455 ZNF274 GTRD no Liver (HepG2) 108031397
chr12 50926846 50927451 ZNF274 GTRD no Liver (HepG2) 21545218
chr12 50926846 50927451 ZNF274 GTRD no Liver (HepG2) 108031401
chr12 50926922 50927571 ZNF274 GTRD no Liver (HepG2) 21545225
chr12 50926922 50927571 ZNF274 GTRD no Liver (HepG2) 108031408
chr12 50926941 50927425 ZNF274 GTRD no Bone Marrow (K562) 21545228
chr12 50926941 50927425 ZNF274 GTRD no Bone Marrow (K562) 108031411
chr12 50926966 50927421 ZNF274 GTRD no Liver (HepG2) 21545231
chr12 50926966 50927421 ZNF274 GTRD no Liver (HepG2) 108031414
chr12 50926967 50927446 ZNF274 GTRD no Liver (HepG2) 21545232
chr12 50926967 50927446 ZNF274 GTRD no Liver (HepG2) 108031415
chr12 50926968 50927582 ZNF274 GTRD no Bone Marrow (K562) 21545233
chr12 50926968 50927582 ZNF274 GTRD no Bone Marrow (K562) 108031416
chr12 50927386 50927407 IRF1 JASPAR yes 120839709
chr12 50927387 50927408 IRF1 JASPAR yes 120839710
chr12 50927390 50927404 SPIC JASPAR yes 120839711
chr12 50927391 50927412 IRF1 JASPAR yes 120839712
chr12 50927393 50927398 ETS2 TRANSFAC yes 120839713
chr12 50927395 50927410 FOXP1 JASPAR yes 120839714
chr12 50927396 50927411 FOXP1 JASPAR yes 120839715
chr12 50927397 50927412 FOXP1 JASPAR yes 120839716
Genes associated with rs111296788[chr12:50927397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More