EnhancerDB
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  3. rs11130550[chr3:56904942]
Enhancers that have rs11130550[chr3:56904942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs11130550[chr3:56904942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56904930 56904944 ONECUT1 JASPAR yes 2606276
chr3 56904930 56904944 ONECUT2 JASPAR yes 2606277
chr3 56904930 56904944 ONECUT3 JASPAR yes 2606278
chr3 56904933 56904943 CUX1 JASPAR yes 2606279
chr3 56904933 56904943 CUX2 JASPAR yes 2606280
chr3 56904934 56904949 HNF1A JASPAR yes 2606281
chr3 56904935 56904949 POU4F1 JASPAR yes 2606282
chr3 56904936 56904948 FOXC2 JASPAR yes 2606283
chr3 56904936 56904948 MEF2D JASPAR yes 2606284
chr3 56904937 56904949 FOXI1 JASPAR yes 2606285
chr3 56904938 56904952 ONECUT2 JASPAR yes 2606286
chr3 56904938 56904952 ONECUT3 JASPAR yes 2606287
chr3 56904938 56904953 FOXP1 JASPAR yes 2606288
chr3 56904938 56904953 HNF1A JASPAR yes 2606289
chr3 56904939 56904953 POU4F1 JASPAR yes 2606290
chr3 56904939 56904954 FOXA1 JASPAR yes 2606291
chr3 56904940 56904951 FOXB1 JASPAR yes 2606292
chr3 56904940 56904951 FOXC1 JASPAR yes 2606293
chr3 56904940 56904951 PROP1 JASPAR yes 2606294
chr3 56904940 56904952 FOXC2 JASPAR yes 2606295
chr3 56904941 56904953 FOXI1 JASPAR yes 2606296
Genes associated with rs11130550[chr3:56904942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More