EnhancerDB
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  3. rs11130554[chr3:56955127]
Enhancers that have rs11130554[chr3:56955127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs11130554[chr3:56955127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56955121 56955134 SMAD2 JASPAR yes 2611418
chr3 56955124 56955134 TBR1 JASPAR yes 2611419
chr3 56955125 56955135 TBX21 JASPAR yes 2611420
chr3 56955126 56955134 MGA JASPAR yes 2611421
chr3 56955126 56955134 TBX15 JASPAR yes 2611422
chr3 56955126 56955134 TBX1 JASPAR yes 2611423
chr3 56955126 56955134 TBX4 JASPAR yes 2611424
chr3 56955126 56955134 TBX5 JASPAR yes 2611425
chr3 56955126 56955135 ZEB1 JASPAR yes 2611426
chr3 56955126 56955138 PKNOX1 JASPAR yes 2611427
chr3 56955126 56955138 TGIF1 JASPAR yes 2611428
chr3 56955126 56955139 ZBTB18 JASPAR yes 2611429
chr3 56955127 56955137 FIGLA JASPAR yes 2611430
chr3 56955127 56955137 ID4 JASPAR yes 2611431
chr3 56955127 56955137 TCF3 JASPAR yes 2611432
chr3 56955127 56955137 TCF4 JASPAR yes 2611433
Genes associated with rs11130554[chr3:56955127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More