EnhancerDB
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  3. rs111409538[chr12:52547612]
Enhancers that have rs111409538[chr12:52547612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs111409538[chr12:52547612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52547500 52548954 ZNF143 GTRD no Epithelial (MCF-7) 21546515
chr12 52547604 52547619 NR2C2 JASPAR yes 120922798
chr12 52547605 52547619 RXRB JASPAR yes 120922799
chr12 52547605 52547619 RXRG JASPAR yes 120922800
chr12 52547610 52547623 NR2F1 JASPAR yes 120922801
Genes associated with rs111409538[chr12:52547612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More