EnhancerDB
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  3. rs111440019[chr1:201422556]
Enhancers that have rs111440019[chr1:201422556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs111440019[chr1:201422556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201421579 201423197 MEF2B GTRD no Blood (Karpas-422) 21364046
chr1 201421614 201422613 ZNF143 GTRD no Epithelial (MCF-7) 21364047
chr1 201422546 201422559 ZBTB18 JASPAR yes 34495198
chr1 201422547 201422559 PKNOX1 JASPAR yes 34495199
chr1 201422547 201422559 PKNOX2 JASPAR yes 34495200
chr1 201422547 201422559 TGIF1 JASPAR yes 34495201
chr1 201422547 201422559 TGIF2 JASPAR yes 34495202
Genes associated with rs111440019[chr1:201422556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More