EnhancerDB
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  3. rs111454399[chr1:54779593]
Enhancers that have rs111454399[chr1:54779593]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs111454399[chr1:54779593]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54779589 54779597 TBX5 JASPAR yes 28972256
chr1 54779589 54779598 ZEB1 JASPAR yes 28972257
chr1 54779589 54779602 ZBTB18 JASPAR yes 28972258
chr1 54779590 54779600 ID4 JASPAR yes 28972259
chr1 54779590 54779600 TCF3 JASPAR yes 28972260
chr1 54779590 54779600 TCF4 JASPAR yes 28972261
chr1 54779592 54779597 USF2 TRANSFAC yes 28972262
Genes associated with rs111454399[chr1:54779593], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More