EnhancerDB
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  3. rs111556862[chr17:38780620]
Enhancers that have rs111556862[chr17:38780620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs111556862[chr17:38780620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38780603 38780624 IRF1 JASPAR yes 54233760
chr17 38780609 38780630 IRF1 JASPAR yes 54233762
chr17 38780610 38780631 IRF1 JASPAR yes 54233763
chr17 38780612 38780626 IRF7 JASPAR yes 54233764
chr17 38780614 38780628 STAT1 JASPAR yes 54233765
chr17 38780615 38780627 ELF1 JASPAR yes 54233766
chr17 38780615 38780628 ELF3 JASPAR yes 54233767
chr17 38780616 38780627 ELF5 JASPAR yes 54233768
chr17 38780616 38780627 ETV2 JASPAR yes 54233769
chr17 38780617 38780627 ERG JASPAR yes 54233770
chr17 38780617 38780627 FEV JASPAR yes 54233771
chr17 38780617 38780627 FLI1 JASPAR yes 54233772
chr17 38780617 38780627 NFATC3 JASPAR yes 54233773
chr17 38780619 38780625 ETS1 JASPAR yes 54233774
Genes associated with rs111556862[chr17:38780620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More