EnhancerDB
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  3. rs11169476[chr12:50917296]
Enhancers that have rs11169476[chr12:50917296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11169476[chr12:50917296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50917288 50917306 NFYA JASPAR yes 120837836
chr12 50917291 50917301 ALX3 JASPAR yes 120837837
chr12 50917291 50917301 GSX2 JASPAR yes 120837838
chr12 50917291 50917301 LBX2 JASPAR yes 120837839
chr12 50917291 50917301 MIXL1 JASPAR yes 120837840
chr12 50917292 50917296 H1TF2 TRANSFAC yes 120837841
chr12 50917292 50917296 NFE TRANSFAC yes 120837842
chr12 50917292 50917296 SRF TRANSFAC yes 120837843
chr12 50917292 50917300 BARX1 JASPAR yes 120837844
chr12 50917292 50917300 BSX JASPAR yes 120837845
chr12 50917292 50917300 EN1 JASPAR yes 120837846
chr12 50917292 50917300 ISX JASPAR yes 120837847
chr12 50917292 50917300 LHX9 JASPAR yes 120837848
chr12 50917292 50917300 MSX1 JASPAR yes 120837849
chr12 50917292 50917300 MSX2 JASPAR yes 120837850
chr12 50917292 50917300 PRRX1 JASPAR yes 120837851
chr12 50917292 50917300 RAX2 JASPAR yes 120837852
chr12 50917292 50917300 SHOX JASPAR yes 120837853
Genes associated with rs11169476[chr12:50917296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More