EnhancerDB
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  3. rs11169490[chr12:50939276]
Enhancers that have rs11169490[chr12:50939276]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11169490[chr12:50939276]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50939267 50939277 SREBF1 JASPAR yes 120841621
chr12 50939267 50939277 SREBF2 JASPAR yes 120841622
chr12 50939272 50939282 SP1 JASPAR yes 120841623
Genes associated with rs11169490[chr12:50939276], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More