EnhancerDB
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Enhancers that have rs11170014[chr12:52539753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs11170014[chr12:52539753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52538139 52539820 ZBTB33 GTRD no Lung (A549) 108033090
chr12 52538170 52539881 ZBTB33 GTRD no Lung (A549) 108033091
chr12 52538502 52540289 ZNF143 GTRD no Epithelial (MCF-7) 21546353
chr12 52538502 52540289 ZNF143 GTRD no Epithelial (MCF-7) 108033092
chr12 52538502 52540289 ZNF143 GTRD no Epithelial (MCF-7) 108033093
chr12 52538625 52539767 ZNF143 GTRD no Epithelial (MCF-7) 21546355
chr12 52538625 52539767 ZNF143 GTRD no Epithelial (MCF-7) 108033096
chr12 52538740 52539765 ZNF143 GTRD no Epithelial (MCF-7) 21546357
chr12 52538740 52539765 ZNF143 GTRD no Epithelial (MCF-7) 108033098
chr12 52538981 52539866 ZNF143 GTRD no Epithelial (MCF-7) 21546364
chr12 52538981 52539866 ZNF143 GTRD no Epithelial (MCF-7) 108033111
chr12 52539001 52539881 ZBTB33 GTRD no Lung (A549) 108033115
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033122
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033123
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033124
chr12 52539379 52542818 POLR2A UCSC Txn Factor no Conserved 108033125
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546373
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033126
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033127
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033128
chr12 52539433 52542587 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033129
chr12 52539471 52539935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546374
chr12 52539471 52539935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033130
chr12 52539551 52539869 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546375
chr12 52539551 52539869 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033131
chr12 52539668 52540941 TCF7L2 GTRD no Colon (HCT116) 21546376
chr12 52539668 52540941 TCF7L2 GTRD no Colon (HCT116) 108033132
chr12 52539668 52540941 TCF7L2 GTRD no Colon (HCT116) 108033133
chr12 52539693 52540373 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546377
chr12 52539693 52540373 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033134
chr12 52539693 52540373 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033135
chr12 52539753 52539762 THAP1 JASPAR yes 120921660
Genes associated with rs11170014[chr12:52539753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More