EnhancerDB
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  3. rs11170041[chr12:52596327]
Enhancers that have rs11170041[chr12:52596327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52596076 52596423 vista13464
VISTA
Transcript factors that have rs11170041[chr12:52596327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52595624 52596336 ZNF274 GTRD no Cervix (HeLa-S3) 21546613
chr12 52595624 52596336 ZNF274 GTRD no Cervix (HeLa-S3) 108033592
chr12 52596194 52596438 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108033595
chr12 52596318 52596329 E2F6 JASPAR yes 82406501
chr12 52596318 52596329 E2F6 JASPAR yes 120927281
chr12 52596318 52596339 ZNF263 JASPAR yes 82406502
chr12 52596318 52596339 ZNF263 JASPAR yes 120927282
chr12 52596319 52596330 E2F1 JASPAR yes 82406503
chr12 52596319 52596330 E2F1 JASPAR yes 120927283
chr12 52596323 52596334 ELK4 JASPAR yes 82406504
chr12 52596323 52596334 FLI1 JASPAR yes 82406505
chr12 52596323 52596334 ELK4 JASPAR yes 120927284
chr12 52596323 52596334 FLI1 JASPAR yes 120927285
chr12 52596324 52596334 ERF JASPAR yes 82406506
chr12 52596324 52596334 ERG JASPAR yes 82406507
chr12 52596324 52596334 ETS1 JASPAR yes 82406508
chr12 52596324 52596334 FLI1 JASPAR yes 82406509
chr12 52596324 52596334 GABPA JASPAR yes 82406510
chr12 52596324 52596334 ERF JASPAR yes 120927286
chr12 52596324 52596334 ERG JASPAR yes 120927287
chr12 52596324 52596334 ETS1 JASPAR yes 120927288
chr12 52596324 52596334 FLI1 JASPAR yes 120927289
chr12 52596324 52596334 GABPA JASPAR yes 120927290
chr12 52596324 52596335 ETV2 JASPAR yes 82406511
chr12 52596324 52596335 ETV2 JASPAR yes 120927291
chr12 52596324 52596337 ELF1 JASPAR yes 82406512
chr12 52596324 52596337 ELF1 JASPAR yes 120927292
Genes associated with rs11170041[chr12:52596327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More