EnhancerDB
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  3. rs11175479[chr12:65027421]
Enhancers that have rs11175479[chr12:65027421]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11175479[chr12:65027421]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65027416 65027425 CDX1 JASPAR yes 121418628
chr12 65027416 65027427 CDX2 JASPAR yes 121418629
Genes associated with rs11175479[chr12:65027421], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 65004293 65091347 + RASSF3 ENSG00000153179.7 65004293 0 Liver 0.000748361 12291