EnhancerDB
  1. Home
  2. SNP
  3. rs111816556[chr1:55025775]
Enhancers that have rs111816556[chr1:55025775]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs111816556[chr1:55025775]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55025762 55025775 SMAD2 JASPAR yes 28992242
chr1 55025775 55025780 TFAP2A TRANSFAC yes 28992243
chr1 55025775 55025781 MZF1 JASPAR yes 28992244
Genes associated with rs111816556[chr1:55025775], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More