EnhancerDB
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  3. rs111859604[chr12:50934363]
Enhancers that have rs111859604[chr12:50934363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs111859604[chr12:50934363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50931879 50935788 ZNF274 GTRD no Bone Marrow (K562) 21545238
chr12 50931879 50935788 ZNF274 GTRD no Bone Marrow (K562) 108031422
chr12 50932270 50935799 ZNF274 GTRD no Liver (HepG2) 21545241
chr12 50932270 50935799 ZNF274 GTRD no Liver (HepG2) 108031425
chr12 50932417 50935869 ZNF274 GTRD no Liver (HepG2) 21545243
chr12 50932417 50935869 ZNF274 GTRD no Liver (HepG2) 108031427
chr12 50934357 50934376 PAX5 JASPAR yes 120840765
chr12 50934361 50934372 NFE2L2 JASPAR yes 120840766
Genes associated with rs111859604[chr12:50934363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 50505762 50514240 + COX14 ENSG00000178449.4 50505762 420123 Adrenal 0.000494081 12047