EnhancerDB
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  3. rs111860392[chr17:40556243]
Enhancers that have rs111860392[chr17:40556243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs111860392[chr17:40556243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40546814 40566881 ZNF274 GTRD no Blood (GM12878) 108260637
chr17 40546874 40564174 ZBTB33 GTRD no Lung (A549) 108260638
chr17 40546896 40561581 ZBTB33 GTRD no Lung (A549) 108260639
chr17 40546905 40566597 ZNF274 GTRD no Blood (GM12878) 108260640
chr17 40546941 40565998 ZNF274 GTRD no Blood (GM12878) 108260641
chr17 40546985 40566407 ZNF274 GTRD no Blood (GM12878) 108260642
chr17 40556124 40562016 ZBTB33 GTRD no Lung (A549) 108260643
chr17 40556229 40556243 ZIC1 JASPAR yes 54301760
chr17 40556232 40556243 EBF1 JASPAR yes 54301761
chr17 40556233 40556244 EBF1 JASPAR yes 54301762
chr17 40556233 40556246 TFAP2A JASPAR yes 54301763
chr17 40556233 40556246 TFAP2B JASPAR yes 54301764
chr17 40556233 40556246 TFAP2C JASPAR yes 54301765
chr17 40556239 40556249 SP1 JASPAR yes 54301766
chr17 40556240 40556250 SP1 JASPAR yes 54301767
chr17 40556241 40556245 LFA1 TRANSFAC yes 54301768
Genes associated with rs111860392[chr17:40556243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More