EnhancerDB
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  3. rs111939728[chr16:85552016]
Enhancers that have rs111939728[chr16:85552016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs111939728[chr16:85552016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85548979 85552235 ZNF274 GTRD no Bone Marrow (K562) 21726853
chr16 85548994 85552184 ZNF274 GTRD no Bone Marrow (K562) 21726854
chr16 85549192 85552186 ZNF143 GTRD no Epithelial (MCF-7) 21726859
chr16 85549362 85552152 ZNF274 GTRD no Liver (HepG2) 21726864
chr16 85549599 85552068 ZNF274 GTRD no Bone Marrow (K562) 21726876
chr16 85549699 85552066 ZNF274 GTRD no Bone Marrow (K562) 21726894
chr16 85550119 85552086 ZNF274 GTRD no Bone Marrow (K562) 21726913
chr16 85550689 85552210 ZNF274 GTRD no Liver (HepG2) 21726936
chr16 85550927 85552128 ZNF274 GTRD no Liver (HepG2) 21726940
chr16 85550980 85552243 ZNF274 GTRD no Bone Marrow (K562) 21726944
chr16 85551244 85552047 ZNF274 GTRD no Liver (HepG2) 21726948
chr16 85551393 85552131 ZNF274 GTRD no Liver (HepG2) 21726951
chr16 85551402 85552029 ZNF274 GTRD no Bone Marrow (K562) 21726952
chr16 85551405 85552161 ZNF274 GTRD no Bone Marrow (K562) 21726953
chr16 85551443 85552044 ZNF274 GTRD no Liver (HepG2) 21726957
chr16 85551469 85552105 ZNF274 GTRD no Liver (HepG2) 21726958
chr16 85551635 85552045 ZNF274 GTRD no Liver (HepG2) 21726959
chr16 85551638 85552159 ZNF274 GTRD no Liver (HepG2) 21726960
chr16 85551721 85552027 ZNF143 GTRD no Epithelial (MCF-7) 21726962
chr16 85551730 85552161 ZNF274 GTRD no Bone Marrow (K562) 21726963
chr16 85552015 85552023 MEIS2 JASPAR yes 12071121
chr16 85552015 85552023 MEIS3 JASPAR yes 12071122
chr16 85552016 85552020 NFE TRANSFAC yes 12071123
Genes associated with rs111939728[chr16:85552016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More