EnhancerDB
  1. Home
  2. SNP
  3. rs111961630[chr6:12353213]
Enhancers that have rs111961630[chr6:12353213]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs111961630[chr6:12353213]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12353198 12353219 IRF1 JASPAR yes 99964904
chr6 12353202 12353214 IRF1 JASPAR yes 99964905
chr6 12353202 12353217 IRF9 JASPAR yes 99964906
Genes associated with rs111961630[chr6:12353213], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More