EnhancerDB
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  3. rs112000227[chr1:204255132]
Enhancers that have rs112000227[chr1:204255132]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112000227[chr1:204255132]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 21370352
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 107859792
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 107859793
chr1 204253704 204255221 AR GTRD no Prostate (PC-3) 21370354
chr1 204253704 204255221 AR GTRD no Prostate (PC-3) 107859795
chr1 204254685 204255163 ZNF274 GTRD no Liver (HepG2) 21370357
chr1 204254685 204255163 ZNF274 GTRD no Liver (HepG2) 107859798
chr1 204254763 204255312 ZNF274 GTRD no Liver (HepG2) 21370358
chr1 204254763 204255312 ZNF274 GTRD no Liver (HepG2) 107859799
chr1 204255117 204255138 ZNF263 JASPAR yes 34688258
chr1 204255120 204255141 ZNF263 JASPAR yes 34688259
chr1 204255123 204255144 ZNF263 JASPAR yes 34688260
chr1 204255131 204255145 SPI1 JASPAR yes 34688261
chr1 204255132 204255145 ELF1 JASPAR yes 34688262
Genes associated with rs112000227[chr1:204255132], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More